Pioneering a New Coffee Industry in California

Juan Medrano and Marta Matvienko

Juan Medrano, co-founder, and Marta Matvienko, lab operations and bioinformatics, breed coffee plants suitable for growth in California at the UC Davis-HM.CLAUSE Life Science Innovation Center in Davis, California.

In 2017, geneticists from UC Davis sequenced the genome of Coffea arabica —a species responsible for 70% of global coffee production—with the goal of developing new high-yielding and high-quality varieties adapted to the stresses caused by climate change.

Progress from the research enabled the formation of a new company, Frinj Coffee, founded by Jay Ruskey, a farmer, and Juan Medrano, a professor and geneticist from the UC Davis College of Agricultural and Environmental Sciences, along with Andy Mullins and Lindsey Mesta. The company is pioneering the coffee growing industry in California, well outside the traditional tropical geographic belt closer to the equator.

In 2018, Frinj Coffee joined the UC Davis-HM.CLAUSE Life Science Innovation Center—part of Venture Catalyst’s DRIVE network of incubators—to further develop novel coffee varietals that are adapted to grow within the specific soil and climate conditions of the state.

Frinj Coffee is providing coffee plants, consulting and post-harvest resources to over 40 new farms across Southern California—and has marketed coffee through Oakland-based roaster Blue Bottle Coffee, San Diego–based Bird Rock and premium international buyers.

Bill Tucker Appointed Interim Associate Vice Chancellor for Innovation and Technology Commercialization at UC Davis

Bill Tucker, vice chancellor for Innovation and Technology Commercialization within the UC Davis Office of Research

William (Bill) Tucker has been appointed interim associate vice chancellor for Innovation and Technology Commercialization within the UC Davis Office of Research.

In his interim role, Tucker will assume responsibility of Venture Catalyst, which facilitates the creation of new ventures and technology startups enabled by university innovations. He will continue to oversee the operations of InnovationAccess, which manages the university’s intellectual property.

Tucker has served as executive director of InnovationAccess since March 2017. Prior to his appointment at UC Davis, Tucker was interim vice president of Research and Graduate Studies (RGS) at the University of California Office of the President. RGS serves as a resource for UC researchers and administrators in research policy, funding for systemwide programs, technology transfer, and graduate education. In that role, Tucker led a team that worked to build UC-wide partnerships, shape effective policies and provide a strong voice nationally for UC research and graduate education.

Before that, he served as executive director of Innovation Alliances and Services where he led a team that reviewed, analyzed and recommended policies, programs and tools that helped UC campuses achieve their efforts to build alliances that transfer discoveries from research enterprise to industry in order to create public benefit. Tucker has also previously held private industry leadership roles in business development, licensing and intellectual property. He received a Ph.D. in Microbiology from the University of Queensland, Australia, and a Master of Business Administration degree from Saint Mary’s College in Moraga, California.

A national search has been initiated to fill the position vacated by Dushyant Pathak, former associate vice chancellor for Innovation and Technology Commercialization who stepped down  to pursue an opportunity in industry.

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Research Inspired by ‘Water Bears’ Leads to Innovations in Medicine, Food Preservation and Blood Storage

The study of microscopic tardigrades, also known as water bears, lead John Crowe and Lois Crowe to groundbreaking discoveries about the unique properties of a simple sugar known as trehalose. The Crowes’ method of preservation using trehalose allows the drug AmBisome® to be safely rehydrated after freeze drying.

The study of microscopic tardigrades, also known as water bears, lead John Crowe and Lois Crowe to groundbreaking discoveries about the unique properties of a simple sugar known as trehalose. The Crowes’ method of preservation using trehalose allows the drug AmBisome® to be safely rehydrated after freeze drying. (Carl Johansson/UC Davis Bohart Museum)

When John Crowe and his wife Lois Crowe were researching tardigrades in the 1970s and 1980s,  nobody knew much about how the speck-sized organisms — also known as water bears — were able to dry up completely, survive for years, and then somehow revive within a few hours when back in water.

Other organisms can do this as well. Brine shrimp, certain nematodes, baker’s yeast, and some desert plants can dry up for years and come back to life when there is water. The mechanism for this trick, though, was a mystery.

John was a professor in the UC Davis Department of Molecular and Cellular Biology and Lois wasa biophysicist in the UC Davis departments of Zoology and of Molecular and Cellular Biology. Together with their students and postdocs, they set out to discover how these organisms are able to survive in a desiccated form for years.

What they found is that nearly all these organisms produce a simple sugar known as trehalose. They also found that the organisms convert as much as 20 percent of their dry weight to trehalose before they can be dried.

The Crowes were able to show that trehalose acts as a water replacement — protecting cells by preventing cell membranes from falling apart and stabilizing proteins and nucleic acids in the dry state.

Their discoveries about the cell-protecting abilities of trehalose opened the door for a wide range of new innovations in food preservation, medicine and blood storage.

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14 New Startups Emerge From UC Davis Innovations

4 New Startups Emerge From UC Davis Innovations

Technologies developed at the University of California, Davis, enabled the foundation of 14 startup companies during the fiscal year ending June 30, 2019.

“Research universities like UC Davis are a key source of vital innovation for numerous industries,” said Prasant Mohapatra, vice chancellor for research at UC Davis. “These startups are undertaking the important first steps in developing and refining the commercial potential of their inventions. It’s exciting to see such a wide range of entrepreneurial undertakings based on our campus innovations.”

Several of the startups are focused on technology solutions addressing important societal needs, including data management for the agriculture industry, software for fraud prevention, and distributed and immutable ledger technology for vital records such as birth certificates.

Many are developing potential solutions to address serious health challenges.

Delix Therapeutics, founded by David Olson, an assistant professor in the Department of Chemistry and the Department of Biochemistry and Molecular Medicine, is an example of such a company. It is investigating whether neural plasticity-promoting drugs could lead to new treatments for depression, anxiety and related disorders without the unwanted hallucinogenic effects of such molecules.

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EXPLORER, a UC Davis imaging breakthrough, makes a media splash

(SACRAMENTO) — EXPLORER, the world’s first total-body positron emission tomography (PET) scanner that can capture a 3D picture of the whole human body at once, is up and running at UC Davis Health.

Developed by UC Davis scientists, EXPLORER has already captured the attention of radiology experts around the world. It was featured in an article in Nature and its images have drawn hundreds of thousands of views on YouTube. The scanner and its inventors were introduced to local media outlets on Monday.

Image quality a game changer

EXPLORER’s exceptional image quality gives it nearly limitless potential applications for both clinical use and research.

“We are thrilled, after almost 15 years, to finally have brought this concept of total-body imaging to fruition,” said co-inventor Simon Cherry, distinguished professor in the UC Davis Department of Biomedical Engineering. “The first images coming off the EXPLORER scanner have exceeded what we, and I think many others in our field, thought would be possible.”

The EXPLORER scanner, which combines PET and x-ray computed tomography (CT), was installed in May in a specially prepared space on Folsom Boulevard. Built by UC Davis industry partner United Imaging Healthcare (UIH), EXPLORER was shipped in two 40-foot containers to a warehouse in Oakland. From there, the parts arrived by truck in several deliveries.

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UC Davis STAIR Grant Awards Over $400K to Advance Innovations Towards Commercialization

Jamie Peyton, chief of integrated medicine at the UC Davis School of Veterinary Medicine, fits a biologic bandages made from tilapia skin onto the badly burned paws of a bear.

Jamie Peyton, chief of integrated medicine at the UC Davis School of Veterinary Medicine, fits a biologic bandages made from tilapia skin onto the badly burned paws of a bear. Peyton and her team have developed a tilapia skin xenograft for use in burn patients to alleviate pain and encourage rapid healing. (UC Davis)

Original post: research.ucdavis.edu/2019-stair-grants

DAVIS, Calif. — Innovators at the University of California, Davis, are receiving financial support to advance their research and technologies toward commercialization.

The Science Translation and Innovative Research (STAIR™) Grant program, managed by Venture Catalyst and funded by the UC Davis Office of Research, provides funding to support translational science and innovative research performed by UC Davis researchers. The goal of the program is to demonstrate early proof-of-concept and commercial potential or feasibility for technologies being developed with the intent of commercial translation.

Award recipients this year include campus investigators developing technologies that could have a significant impact on pressing human and animal health issues as well as creating efficiencies to nourish and feed the world.

“It is exciting to see how the award recipients are addressing a wide range of unmet challenges in nutrition and health,” said Prasant Mohapatra, vice chancellor for research at UC Davis. “With the STAIR Grant program, we are able to support the creativity and ingenuity of our researchers in these programs to translate their innovations into commercial applications that help bolster our economy and improve quality of life.”

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UC Davis Honors Recipients of 2019 Chancellor’s Innovation Awards

Recipients for Innovator of the Year are Jamie Peyton, chief of Integrative Medicine Service at the UC Davis School of Veterinary Medicine, and Michael Rogawski, professor in the UC Davis Departments of Neurology and Pharmacology and former chair of the Department of Neurology

This year’s recipients for Innovator of the Year are Jamie Peyton, chief of Integrative Medicine Service at the UC Davis School of Veterinary Medicine, and Michael Rogawski, professor in the UC Davis Departments of Neurology and Pharmacology and former chair of the Department of Neurology.

Original post: research.ucdavis.edu/uc-davis-honors-recipients-of-2019-chancellors-innovation-awards

The University of California, Davis, announced the recipients of the 2019 Chancellor’s Innovation Awards at a ceremony at the UC Davis Mondavi Center for the Performing Arts tonight (May 30). It is the fourth year for the awards, which recognize the important contributions of faculty, community partners and industry leaders in helping to establish UC Davis as a global leader in innovation.

“These honorees represent the spirit of excellence and innovation that distinguishes UC Davis as one of the best public research universities in the nation,” said Chancellor Gary May. “They are the game-changers making a positive impact — not only in our region, but also around the world.”

“It is both a pleasure and a privilege to celebrate the campus innovators and community partners whose contributions have resulted in important societal and regional impact in the last year as well as through their lifetime of innovative achievement,” said Dushyant Pathak, associate vice chancellor of Innovation and Technology Commercialization, a division of the Office of Research, and the executive director of Venture Catalyst, a unit within this division.  Venture Catalyst manages the award.

Innovator of the Year

This year’s recipients for Innovator of the Year are Jamie Peyton, chief of Integrative Medicine Service at the UC Davis School of Veterinary Medicine, and Michael Rogawski, professor in the UC Davis Departments of Neurology and Pharmacology and former chair of the Department of Neurology.

The Innovator of the Year award recognizes individual faculty, staff or teams whose innovative research or accomplishments have made a measurable societal impact in the preceding year, or whose university activities have achieved important milestones, and have had or present very strong potential for societal impact. Recipients receive $10,000 which can be applied to their research or to their university enabled societal engagement efforts.

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Connecting the Future: How a UC Davis Invention Helped Build Broadband Communications

How a UC Davis Invention Helped Build Broadband Communications

n 1997, when broadband communications and the “World Wide Web” were both in their infancy, two UC Davis professors and a graduate student came up with a better way to route data in fiber optic networks. Their patented invention became a critical component for fiber optic communications around the globe, bringing internet and phone traffic to millions of people. (iStock)

Original post: research.ucdavis.edu/connecting-the-future-how-a-uc-davis-invention-helped-build-broadband-communications-wss

Jonathan Heritage has never seen a manufactured version of the device he co-invented, although he once saw a prototype at Movaz Networks Inc., the first company to license the patent.

“It fit into one slot on an electronics rack, so it was as wide as that.” Heritage, a retired professor of engineering, held his hands about a foot and a half apart. “It was just a box. But inside, there were a whole lot of electronics, which were needed to drive all those mirrors,” said Heritage.

That nondescript box contained what the telecommunications industry refers to as a wavelength selective switch, known as WSS, a sophisticated device that uses tiny mirrors to route signals between fiber optic cables.

“You can find WSS where a lot of fibers come together for information flow, such as switching facilities in big cities,” said Heritage.

When Heritage and his co-inventors at UC Davis first conceived of WSS in the mid- to late-1990s, broadband was mostly just an idea, and the internet, or more specifically the World Wide Web, was in its infancy but growing rapidly.

In 1997, only 18 percent of U.S. households were using the internet, and Amazon, “the leading online retailer of books,” was only three years old. Google wouldn’t be founded until the following year, and AOL’s 10 million subscribers were mostly using dial-up connections through their telephone lines to get internet access.

About that same time, telecommunications companies were beginning to build fiber optic networks that could carry significantly more data than the traditional copper wire used in the phone systems.

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Groundbreaking cancer research fueled by talent, funding and resources in Davis

ARIZ Precision Medicine is pioneering cancer research out of their lab in Davis. They’re working to create a safer alternative to chemotherapy by developing a drug that targets cancer cells. ARIZ modulates cancer-causing genes and proteins to induce a natural, biological death in cancer cells. So far, their data shows their drug can kill 90 percent of cancer cells in a dish while only affecting five to ten percent of normal cells, whereas traditional chemotherapy affects both types of cells equally. As we learned during a recent visit with ARIZ at their lab at the UC Davis-HM Clause Life Science Innovation Center, much of their success is tied to the resources they’ve been able to tap into in Greater Sacramento, including a wealth of support from the University of California, Davis.

The Greater Sacramento advantage

ARIZ has deep connections to Davis. Many of its staff are either from Davis, went to UC Davis or settled down there before joining the company. ARIZ Founder, CEO and Chairman Lonnie Bookbinder obtained his undergraduate degree in biology from UC Davis. After working around the country, he moved back to Davis to start ARIZ.

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Neurologic Disease Research at UC Davis Contributes to First Treatment Specifically Approved for Postpartum Depression

Michael Rogawski conducted lab and clinical research on the neuro-steroid

Dorota Zolkowska and Michael Rogawski. Michael Rogawski, a professor in the UC Davis Department of Neurology, and Dorota Zolkowska, a project scientist in Rogawski’s research laboratory, conducted studies resulting in inventions related to allopregnanolone as a potential treatment for neurological diseases.

Dorota Zolkowska and Michael Rogawski. Michael Rogawski, a professor in the UC Davis Department of Neurology, and Dorota Zolkowska, a project scientist in Rogawski’s research laboratory, conducted studies resulting in inventions related to allopregnanolone as a potential treatment for neurological diseases. (Rudy Meyers Photography)

Original post: research.ucdavis.edu/ucdavis_sage_therapeutics

(SACRAMENTO) — Sage Therapeutics announced March 19 the U.S. Food and Drug Administration’s approval of its product, Zulresso™ (brexanolone) injection, for the treatment of postpartum depression in women. Initial development of an intravenous formulation of allopregnanolone (also known as brexanolone) and first-in-human clinical studies were conducted by Michael Rogawski, a professor in the UC Davis Departments of Neurology and Pharmacology. Rogawski is former chair of the Department of Neurology.

In laboratory-based and clinical research, Rogawski and his colleagues investigated the neuroactive steroid allopregnanolone as a potential therapeutic agent for neurological diseases. The University of California granted rights to Sage Therapeutics, including licenses to certain patent rights, for the commercial use of allopregnanolone.

This is the first drug approved by the FDA specifically for postpartum depression. Postpartum depression is the most common medical complication of childbirth and affects approximately one in nine women who have given birth in the U.S.

“It’s very exciting to see the development of this treatment reach such a significant milestone, offering new hope to those affected by postpartum depression,” said Prasant Mohapatra, vice chancellor for research at UC Davis. “This is a wonderful example illustrating the role UC Davis research plays in helping to address needs around world.”

Neuro-steroid a good candidate for post-partum depression treatment

Allopregnanolone is a naturally occurring neuroactive steroid derived from the female sex hormone progesterone. Rogawski became interested in allopregnanolone as a potential treatment for postpartum depression because studies with neuroactive steroids conducted in his and other laboratories showed antidepressant potential.

“Blood levels of progesterone, and therefore allopregnanolone, rise dramatically as pregnancy progresses, but begin to decrease in late pregnancy and then fall precipitously during the day or two after giving birth,” said Rogawski. “I reasoned that allopregnanolone levels might also fall and I hypothesized that the withdrawal of this endogenous antidepressant substance could trigger depression for some women. This led to the discovery of allopregnanolone as a treatment for postpartum depression.”

“From my very first engagement with Sage Therapeutics several years ago, the commitment of the company’s principals to work with the university to enable the development and commercialization of this important discovery was evident,” said Dushyant Pathak, UC Davis associate vice chancellor for research and executive director of Venture Catalyst. “At the university, we reciprocated through creative and goal-oriented approaches to structuring patent, data and material transfer agreements to support Sage’s development of this much-needed treatment.”

In addition to licensed patent rights, Sage Therapeutics was granted a right of reference to the University of California’s Investigational New Drug (IND) application package related to the use of allopregnanolone, which facilitated Sage’s transition of allopregnanolone into the clinic. The university also made allopregnanolone drug substance available for Sage’s use in early clinical trials.

“Up until the development of brexanolone, there was no specific treatment for postpartum depression. I am extremely pleased that our research has led to a rapidly acting treatment for this all-too-common condition,” said Rogawski.

About postpartum depression

Postpartum depression is a distinct and readily identified major depressive disorder that may have devastating consequences for a woman and for her family, which may include significant functional impairment, depressed mood and/or loss of interest in her newborn, and associated symptoms of depression such as loss of appetite, difficulty sleeping, motor challenges, lack of concentration, loss of energy and poor self-esteem. In developed countries, suicide is the leading cause of maternal death following childbirth. Postpartum depression affects approximately one in nine women who have given birth in the U.S. and 400,000 women annually. More than half of these cases may go undiagnosed without proper screening.

Rogawski and UC Davis project scientist Dorota Zolkowska are the inventors of U.S. Patent No. 10,251,894 B2, issued to the Regents of the University of California on April 9, 2019, and claiming methods of treating post-partum depression.

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